miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18484	-	51058	86	22	-20	NP_817530		5' arm      3' arm
18458	-	40850	89	20.5	-20			5' arm      3' arm
18533	-	72939	87	20.5	-20	NP_817584		5' arm      3' arm
18466	-	42923	86	19	-20	NP_817510		5' arm      3' arm
18384	-	12544	89	21	-20	NP_817468		5' arm      3' arm
18405	-	20021	89	20.5	-20.1	NP_817473		5' arm      3' arm
18312	+	38070	85	21	-20.2			5' arm      3' arm
18262	+	9439	90	20.5	-20.2	NP_817462		5' arm      3' arm
18401	-	19124	86	25	-20.2	NP_817473		5' arm      3' arm
18352	+	70756	90	21.5	-20.2	NP_817577		5' arm      3' arm
18520	-	65812	81	21.5	-20.2	NP_817562		5' arm      3' arm
18424	-	26546	87	20.5	-20.3	NP_817477		5' arm      3' arm
18498	-	56142	90	20	-20.4	NP_817542		5' arm      3' arm
18300	+	31974	88	22.5	-20.4	NP_817483		5' arm      3' arm
18306	+	34993	89	19	-20.4	NP_817490		5' arm      3' arm
18441	-	33512	84	19.5	-20.5	NP_817486		5' arm      3' arm
18320	+	47516	89	20	-20.5	NP_817520		5' arm      3' arm
18382	-	12189	85	19.5	-20.6	NP_817468		5' arm      3' arm
18249	+	773	87	19	-20.7	NP_817453		5' arm      3' arm
18389	-	13436	89	20	-20.7	NP_817470		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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