miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18539	+	188	89	19.5	-26.7			5' arm      3' arm
18540	+	557	90	23	-28.7	NP_817592		5' arm      3' arm
18541	+	3587	88	19	-21.4	NP_817597		5' arm      3' arm
18542	+	4131	87	19.5	-19.4			5' arm      3' arm
18543	+	4698	89	20	-26.9	NP_817599		5' arm      3' arm
18544	+	4843	90	20	-29.8	NP_817599		5' arm      3' arm
18545	+	5291	89	19	-21.2	NP_817599		5' arm      3' arm
18546	+	5403	87	20	-22.8	NP_817599		5' arm      3' arm
18547	+	5869	90	22.5	-21.9	NP_817599		5' arm      3' arm
18548	+	7160	87	21	-25.9	NP_817601		5' arm      3' arm
18549	+	7990	89	22.5	-23.9	NP_817601		5' arm      3' arm
18550	+	8167	89	19	-24.4	NP_817601		5' arm      3' arm
18551	+	8320	90	20	-20.8	NP_817601		5' arm      3' arm
18552	+	8654	90	21	-24.7	NP_817601		5' arm      3' arm
18553	+	8951	87	19	-25.1	NP_817602		5' arm      3' arm
18554	+	9606	90	22.5	-27.8	NP_817602		5' arm      3' arm
18555	+	10301	83	20.5	-28.4	NP_817603		5' arm      3' arm
18556	+	10392	88	20	-24.1	NP_817603		5' arm      3' arm
18557	+	10807	89	20	-25	NP_817603		5' arm      3' arm
18558	+	10945	86	19.5	-27.1	NP_817603		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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