miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
29566021 NC_004682.1 Mycobacteriophage Bxz2 virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
18663 - 5591 89 24.5 -22.3 NP_817599 5' arm      3' arm
18634 + 45557 89 24.5 -27.5 NP_817664 5' arm      3' arm
18739 - 41816 88 24 -23.3 NP_817653 5' arm      3' arm
18574 + 18200 88 24 -21.5 NP_817615 5' arm      3' arm
18570 + 16921 83 24 -27.4 NP_817615 5' arm      3' arm
18688 - 12000 85 24 -20.91 NP_817605 5' arm      3' arm
18658 - 4319 87 23.5 -23.7 NP_817598 5' arm      3' arm
18675 - 8696 87 23.5 -32.9 NP_817601 5' arm      3' arm
18672 - 7968 90 23.5 -23 NP_817601 5' arm      3' arm
18596 + 29640 87 23.5 -23.6 NP_817631 5' arm      3' arm
18676 - 8908 90 23.5 -24.8 NP_817602 5' arm      3' arm
18684 - 11030 86 23.5 -23.7 NP_817603 5' arm      3' arm
18743 - 46261 90 23 -29.5 NP_817667 5' arm      3' arm
18655 - 3124 89 23 -23.9 NP_817596 5' arm      3' arm
18540 + 557 90 23 -28.7 NP_817592 5' arm      3' arm
18639 + 47173 89 23 -25.4 NP_817669 5' arm      3' arm
18659 - 4471 89 23 -21.2 NP_817598 5' arm      3' arm
18605 + 33090 88 23 -25 NP_817637 5' arm      3' arm
18708 - 22530 87 23 -32.7 NP_817618 5' arm      3' arm
18677 - 9129 89 23 -21.7 NP_817602 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.