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| GenBank Identifier | RefSeq Acc. | Name |
| 29566284 | NC_004685.1 | Mycobacteriophage Corndog virion |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 19278 | + | 4310 | 89 | 22 | -20.3 | NP_817863 | 5' arm 3' arm | ||
| 19277 | + | 4191 | 85 | 21.5 | -21.1 | NP_817863 | 5' arm 3' arm | ||
| 19399 | - | 5185 | 88 | 22 | -29.9 | NP_817864 | 5' arm 3' arm | ||
| 19400 | - | 5433 | 90 | 20 | -21.8 | NP_817865 | 5' arm 3' arm | ||
| 19402 | - | 5620 | 89 | 19 | -22.1 | NP_817866 | 5' arm 3' arm | ||
| 19403 | - | 5720 | 89 | 22 | -23.4 | NP_817866 | 5' arm 3' arm | ||
| 19405 | - | 6160 | 86 | 20.5 | -22.7 | NP_817866 | 5' arm 3' arm | ||
| 19404 | - | 5810 | 90 | 22.5 | -20.9 | NP_817866 | 5' arm 3' arm | ||
| 19401 | - | 5531 | 89 | 19.5 | -19.6 | NP_817866 | 5' arm 3' arm | ||
| 19281 | + | 5632 | 85 | 19.5 | -20.5 | NP_817866 | 5' arm 3' arm | ||
| 19282 | + | 6632 | 89 | 19 | -24.6 | NP_817868 | 5' arm 3' arm | ||
| 19407 | - | 6849 | 90 | 19 | -25.1 | NP_817868 | 5' arm 3' arm | ||
| 19406 | - | 6757 | 90 | 22.5 | -20.4 | NP_817868 | 5' arm 3' arm | ||
| 19408 | - | 7155 | 89 | 21.5 | -31 | NP_817869 | 5' arm 3' arm | ||
| 19409 | - | 7973 | 88 | 19 | -26.7 | NP_817871 | 5' arm 3' arm | ||
| 19410 | - | 8251 | 86 | 19.5 | -24.4 | NP_817872 | 5' arm 3' arm | ||
| 19283 | + | 8499 | 90 | 24.5 | -26.7 | NP_817873 | 5' arm 3' arm | ||
| 19287 | + | 10174 | 88 | 21 | -23.8 | NP_817873 | 5' arm 3' arm | ||
| 19288 | + | 10279 | 89 | 20 | -21.9 | NP_817873 | 5' arm 3' arm | ||
| 19415 | - | 10305 | 88 | 19 | -19.4 | NP_817873 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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