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| GenBank Identifier | RefSeq Acc. | Name |
| 29566407 | NC_004686.1 | Mycobacteriophage Che9d virion |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 19639 | + | 51127 | 90 | 20.5 | -26.3 | NP_955481 | 5' arm 3' arm | ||
| 19600 | + | 26575 | 86 | 20.5 | -28.3 | NP_818008 | 5' arm 3' arm | ||
| 19565 | + | 7100 | 89 | 20.5 | -35.4 | NP_817985 | 5' arm 3' arm | ||
| 19731 | - | 55652 | 90 | 20.5 | -31.1 | NP_818076 | 5' arm 3' arm | ||
| 19607 | + | 30406 | 86 | 20.5 | -22.2 | NP_818018 | 5' arm 3' arm | ||
| 19702 | - | 43039 | 87 | 20.5 | -34.6 | NP_818048 | 5' arm 3' arm | ||
| 19671 | - | 23501 | 90 | 20.5 | -20.9 | 5' arm 3' arm | |||
| 19628 | + | 45905 | 88 | 21 | -25.2 | NP_818055 | 5' arm 3' arm | ||
| 19629 | + | 46079 | 90 | 21 | -26.4 | NP_818056 | 5' arm 3' arm | ||
| 19719 | - | 50909 | 87 | 21 | -29.5 | NP_955480 | 5' arm 3' arm | ||
| 19699 | - | 41731 | 89 | 21 | -24.5 | NP_818046 | 5' arm 3' arm | ||
| 19572 | + | 10485 | 90 | 21 | -20.3 | NP_817990 | 5' arm 3' arm | ||
| 19679 | - | 26348 | 89 | 21 | -19.5 | NP_818008 | 5' arm 3' arm | ||
| 19575 | + | 12299 | 89 | 21 | -20.3 | NP_817990 | 5' arm 3' arm | ||
| 19641 | - | 5126 | 89 | 21 | -25.7 | NP_817980 | 5' arm 3' arm | ||
| 19595 | + | 22658 | 89 | 21 | -22.3 | NP_817999 | 5' arm 3' arm | ||
| 19599 | + | 25825 | 90 | 21 | -25.8 | NP_818008 | 5' arm 3' arm | ||
| 19615 | + | 38161 | 90 | 21 | -24.7 | NP_818035 | 5' arm 3' arm | ||
| 19666 | - | 18585 | 90 | 21 | -21.61 | NP_817997 | 5' arm 3' arm | ||
| 19610 | + | 33529 | 90 | 21 | -26.1 | NP_818024 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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