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| GenBank Identifier | RefSeq Acc. | Name |
| 29566737 | NC_004688.1 | Mycobacteriophage Omega virion |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 20565 | + | 101277 | 90 | 20 | -27.2 | NP_818506 | 5' arm 3' arm | ||
| 20695 | - | 72690 | 89 | 19 | -27.2 | NP_818437 | 5' arm 3' arm | ||
| 20602 | - | 14729 | 86 | 20.5 | -27 | 5' arm 3' arm | |||
| 20476 | + | 41734 | 88 | 22.5 | -26.9 | NP_818351 | 5' arm 3' arm | ||
| 20684 | - | 63701 | 87 | 20.5 | -26.9 | NP_818413 | 5' arm 3' arm | ||
| 20594 | - | 11241 | 89 | 19.5 | -26.9 | NP_818316 | 5' arm 3' arm | ||
| 20532 | + | 86274 | 90 | 19 | -26.8 | NP_818464 | 5' arm 3' arm | ||
| 20526 | + | 81640 | 90 | 24 | -26.8 | NP_818456 | 5' arm 3' arm | ||
| 20678 | - | 61212 | 86 | 23 | -26.76 | NP_818403 | 5' arm 3' arm | ||
| 20753 | - | 106739 | 88 | 20 | -26.7 | NP_818523 | 5' arm 3' arm | ||
| 20709 | - | 77595 | 90 | 20 | -26.7 | NP_818450 | 5' arm 3' arm | ||
| 20665 | - | 49864 | 90 | 19.5 | -26.5 | NP_818372 | 5' arm 3' arm | ||
| 20438 | + | 22940 | 87 | 22 | -26.5 | NP_818335 | 5' arm 3' arm | ||
| 20550 | + | 95904 | 90 | 23 | -26.5 | NP_818493 | 5' arm 3' arm | ||
| 20593 | - | 10875 | 90 | 22 | -26.4 | NP_818316 | 5' arm 3' arm | ||
| 20651 | - | 44071 | 89 | 20 | -26.4 | NP_818354 | 5' arm 3' arm | ||
| 20547 | + | 92925 | 88 | 20 | -26.3 | NP_818480 | 5' arm 3' arm | ||
| 20513 | + | 73362 | 90 | 21.5 | -26.3 | NP_818439 | 5' arm 3' arm | ||
| 20469 | + | 37273 | 85 | 22.5 | -26.2 | NP_818342 | 5' arm 3' arm | ||
| 20734 | - | 93464 | 90 | 19 | -26.2 | NP_818483 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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