miRNA display CGI


Results 1 - 20 of 161 are showing below:
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GenBank Identifier RefSeq Acc. Name
29566975 NC_004689.1 Mycobacteriophage Barnyard virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
20814 + 42951 74 19.5 -36.2 NP_818598 5' arm      3' arm
20825 + 60573 90 24 -35.7 NP_818625 5' arm      3' arm
20888 - 42028 89 24 -35.5 5' arm      3' arm
20876 - 36875 82 20.5 -31.5 5' arm      
20841 - 11128 90 24.5 -31.4 NP_818557       3' arm
20804 + 37353 85 22 -30.8 5' arm      3' arm
20920 - 70537 89 23 -30.5 5' arm      3' arm
20857 - 16159 82 20 -30.4 NP_818567 5' arm      3' arm
20767 + 12935 87 23 -29.9 NP_818559 5' arm      3' arm
20850 - 13020 85 22 -29.9 NP_818559 5' arm      
20894 - 49108 87 25.5 -29.8 5' arm      3' arm
20835 - 1775 90 21.5 -29.5 NP_818541 5' arm      3' arm
20885 - 41324 90 25.5 -29.3 NP_818594 5' arm      3' arm
20790 + 29552 89 22 -29.3 NP_818574 5' arm      3' arm
20806 + 37929 85 21.5 -29.2 NP_818587 5' arm      3' arm
20805 + 37452 89 28.5 -28.9 5' arm      3' arm
20848 - 12800 90 21 -28.8 NP_818559       3' arm
20887 - 41932 87 24 -28.3 NP_818594 5' arm      3' arm
20918 - 69066 90 26 -28.3 NP_818646 5' arm      3' arm
20777 + 19986 88 21 -28.2 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.