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| GenBank Identifier | RefSeq Acc. | Name |
| 29566975 | NC_004689.1 | Mycobacteriophage Barnyard virion |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 20813 | + | 41066 | 88 | 19.5 | -24.6 | NP_818594 | 5' arm 3' arm | ||
| 20859 | - | 16928 | 87 | 20 | -24.5 | NP_818568 | 5' arm 3' arm | ||
| 20766 | + | 12060 | 90 | 19.5 | -24.4 | NP_818559 | 5' arm 3' arm | ||
| 20896 | - | 50583 | 89 | 19 | -24.4 | NP_818610 | 5' arm 3' arm | ||
| 20818 | + | 53771 | 88 | 20 | -24.4 | NP_818615 | 5' arm 3' arm | ||
| 20823 | + | 57719 | 89 | 19 | -24.3 | NP_818618 | 5' arm 3' arm | ||
| 20902 | - | 53415 | 90 | 20.5 | -24.2 | 5' arm 3' arm | |||
| 20913 | - | 64482 | 88 | 20.5 | -24.1 | NP_818636 | 5' arm 3' arm | ||
| 20781 | + | 20759 | 88 | 19.5 | -24.1 | NP_818571 | 5' arm 3' arm | ||
| 20770 | + | 16500 | 75 | 20 | -24 | NP_818568 | 5' arm 3' arm | ||
| 20906 | - | 55063 | 90 | 20.5 | -23.9 | NP_818618 | 5' arm 3' arm | ||
| 20812 | + | 40258 | 86 | 21.5 | -23.7 | 5' arm 3' arm | |||
| 20853 | - | 14716 | 88 | 19 | -23.7 | NP_818563 | 5' arm 3' arm | ||
| 20877 | - | 37270 | 84 | 21.5 | -23.7 | NP_818586 | 5' arm 3' arm | ||
| 20786 | + | 23763 | 90 | 20 | -23.6 | NP_818571 | 5' arm 3' arm | ||
| 20760 | + | 2165 | 87 | 19 | -23.6 | NP_818542 | 5' arm 3' arm | ||
| 20834 | - | 311 | 89 | 27.5 | -23.5 | NP_818539 | 5' arm 3' arm | ||
| 20897 | - | 51024 | 87 | 19.5 | -23.5 | NP_818611 | 5' arm | ||
| 20843 | - | 11705 | 89 | 19 | -23.3 | NP_818558 | 5' arm 3' arm | ||
| 20788 | + | 25870 | 90 | 20.5 | -23.3 | NP_818573 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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