miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17509	-	28023	89	24.5	-25	NP_758928		5' arm      3' arm
17483	+	25325	87	24	-26.9	NP_758925		5' arm      3' arm
17497	+	42590	90	24	-22.7	NP_758949		5' arm      3' arm
17508	-	22793	90	23.5	-22.9	NP_758920		5' arm      3' arm
17489	+	34668	87	23.5	-23.3	NP_758934		5' arm      3' arm
17472	+	11893	86	23.5	-20.9	NP_758908		5' arm      3' arm
17502	-	15903	89	23	-25.2	NP_758914		5' arm      3' arm
17470	+	7338	87	23	-22.5	NP_758900		5' arm      3' arm
17493	+	36720	89	23	-23.4	NP_758937		5' arm      3' arm
17495	+	37448	89	23	-22	NP_758937		5' arm      3' arm
17484	+	25442	90	22.5	-20.9	NP_758925		5' arm      3' arm
17503	-	17870	89	22.5	-26.4	NP_758915		5' arm      3' arm
17490	+	35194	90	22.5	-19.7	NP_758934		5' arm      3' arm
17512	-	32297	89	22.5	-23.6			5' arm      3' arm
17494	+	36833	87	21.5	-22.1	NP_758937		5' arm      3' arm
17471	+	7730	79	21.5	-25.5	NP_758900		5' arm      3' arm
17474	+	15179	87	21.5	-32.9			5' arm      3' arm
17488	+	34178	89	21.5	-25.2	NP_758934		5' arm      3' arm
17486	+	27501	90	21.5	-20.8	NP_758928		5' arm      3' arm
17487	+	28196	89	21.5	-19.8	NP_758928		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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