miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
14695	+	16878	90	24	-20.2	NP_613100		5' arm      3' arm
14715	-	21217	88	19	-24.7	NP_613105		5' arm      3' arm
14714	-	20803	82	20	-19.7	NP_613105		5' arm      3' arm
14716	-	21726	88	22	-21.4	NP_613105		5' arm      3' arm
14696	+	20714	89	22	-21.5	NP_613105		5' arm      3' arm
14717	-	21877	90	25	-23.3	NP_613106		5' arm      3' arm
14697	+	25455	87	19.5	-21.3	NP_613111		5' arm      3' arm
14698	+	30094	90	20.5	-20.7	NP_613115		5' arm      3' arm
14699	+	34242	90	20	-21.7	NP_613120		5' arm      3' arm
14700	+	39840	86	19.5	-20.8	NP_613125		5' arm      3' arm
14701	+	44131	83	19.5	-19.4	NP_613131		5' arm      3' arm
14718	-	55109	89	23	-23.9	NP_613143		5' arm      3' arm
14702	+	56420	87	22	-20.8	NP_613146		5' arm      3' arm
14719	-	58274	89	22	-22.6	NP_613149		5' arm      3' arm
14703	+	58125	87	19	-23.7	NP_613149		5' arm      3' arm
14720	-	59198	89	19	-20.1	NP_613151		5' arm      3' arm
14704	+	65332	90	20	-24.4	NP_613157		5' arm      3' arm
14721	-	68021	89	19.5	-20	NP_613160		5' arm      3' arm
14705	+	67939	86	21	-19.7	NP_613160		5' arm      3' arm
14706	+	72589	87	23.5	-22.3	NP_613165		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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