miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21221	+	48667	83	26.5	-26.4	NP_848371		5' arm      3' arm
21222	+	50795	90	19	-19.5	NP_848372		5' arm      3' arm
21223	+	52318	89	20	-19.4	NP_848372		5' arm      3' arm
21224	+	56968	79	21	-28.1	NP_848376		5' arm      3' arm
21225	+	57327	89	21.5	-23	NP_848376		5' arm      3' arm
21226	+	57999	86	20.5	-26.2	NP_848377		5' arm      3' arm
21227	+	59550	89	20.5	-20.2	NP_848381		5' arm      3' arm
21228	+	61402	89	19	-25	NP_848384		5' arm      3' arm
21229	+	62035	89	20	-19.9	NP_848386		5' arm      3' arm
21230	+	63500	90	19.5	-23.2	NP_848388		5' arm      3' arm
21231	+	64193	90	21.5	-25.7	NP_848389		5' arm      3' arm
21232	+	64676	89	20.5	-26.5	NP_848389		5' arm      3' arm
21233	+	65779	85	21.5	-27.5	NP_848389		5' arm      3' arm
21234	+	66488	88	23.5	-25.7			5' arm      3' arm
21235	+	66642	90	28.5	-29			5' arm      3' arm
21236	+	66744	85	22.5	-19.5			5' arm      3' arm
21237	+	69474	89	20	-22	NP_848392		5' arm      3' arm
21238	+	77178	89	23	-21.4	NP_848398		5' arm      3' arm
21239	+	77648	89	23	-21.4	NP_848399		5' arm      3' arm
21240	+	80181	84	20	-27.7	NP_848402		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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