miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
24943167 NC_004365.1 Aphid lethal paralysis virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17259 + 3885 81 22 -23.5 NP_733845 5' arm      3' arm
17260 + 7655 89 25 -25.7 NP_733846 5' arm      3' arm
17261 + 8300 89 19 -19.4 NP_733846 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.