miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21121	+	2006	88	23.5	-24	NP_848210		5' arm      3' arm
21122	+	9383	86	20	-21.2	NP_848220		5' arm      3' arm
21123	+	9719	80	21	-25.2	NP_848220		5' arm      3' arm
21124	+	13920	89	19	-26.3	NP_848223		5' arm      3' arm
21125	+	15341	90	22.5	-20.3	NP_848224		5' arm      3' arm
21126	+	17811	90	19.5	-23.3	NP_848225		5' arm      3' arm
21127	+	21318	89	23	-21.6	NP_848228		5' arm      3' arm
21128	+	24741	86	27	-33.1			5' arm      3' arm
21129	+	25659	89	21.5	-19.6	NP_848233		5' arm      3' arm
21130	+	25855	90	22.5	-27.1	NP_848233		5' arm      3' arm
21131	+	26100	89	21.5	-22	NP_848234		5' arm      3' arm
21132	+	26371	90	22.5	-21.4	NP_848234		5' arm      3' arm
21133	+	27740	89	19	-22	NP_848235		5' arm      3' arm
21134	+	30045	89	22	-20.5	NP_848242		5' arm      3' arm
21135	+	30745	90	20	-20.7	NP_848242		5' arm      3' arm
21136	+	31792	90	19.5	-20.8	NP_848243		5' arm      3' arm
21137	+	36160	84	20	-22.8	NP_848251		5' arm      3' arm
21138	+	38673	90	20.5	-35.6	NP_848255		5' arm      3' arm
21139	-	846	90	23.5	-20.6	NP_848210		5' arm      3' arm
21140	-	1157	87	22.5	-23.7	NP_848210		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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