miRNA display CGI


Results 1 - 20 of 41 are showing below:
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GenBank Identifier RefSeq Acc. Name
30387379 NC_004775.1 Enterobacteria phage epsilon15

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21121 + 2006 88 23.5 -24 NP_848210 5' arm      3' arm
21122 + 9383 86 20 -21.2 NP_848220 5' arm      3' arm
21123 + 9719 80 21 -25.2 NP_848220 5' arm      3' arm
21124 + 13920 89 19 -26.3 NP_848223 5' arm      3' arm
21125 + 15341 90 22.5 -20.3 NP_848224 5' arm      3' arm
21126 + 17811 90 19.5 -23.3 NP_848225 5' arm      3' arm
21127 + 21318 89 23 -21.6 NP_848228 5' arm      3' arm
21128 + 24741 86 27 -33.1 5' arm      3' arm
21129 + 25659 89 21.5 -19.6 NP_848233 5' arm      3' arm
21130 + 25855 90 22.5 -27.1 NP_848233 5' arm      3' arm
21131 + 26100 89 21.5 -22 NP_848234 5' arm      3' arm
21132 + 26371 90 22.5 -21.4 NP_848234 5' arm      3' arm
21133 + 27740 89 19 -22 NP_848235 5' arm      3' arm
21134 + 30045 89 22 -20.5 NP_848242 5' arm      3' arm
21135 + 30745 90 20 -20.7 NP_848242 5' arm      3' arm
21136 + 31792 90 19.5 -20.8 NP_848243 5' arm      3' arm
21137 + 36160 84 20 -22.8 NP_848251 5' arm      3' arm
21138 + 38673 90 20.5 -35.6 NP_848255 5' arm      3' arm
21139 - 846 90 23.5 -20.6 NP_848210 5' arm      3' arm
21140 - 1157 87 22.5 -23.7 NP_848210 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.