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GenBank Identifier | RefSeq Acc. | Name |
28144357 | NC_004553.1 | Turnip rosette virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
17692 | + | 624 | 90 | 23.5 | -27.6 | NP_778215 | 5' arm 3' arm | ||
17693 | + | 3268 | 88 | 22.5 | -26.8 | NP_778218 | 5' arm 3' arm | ||
17694 | + | 3850 | 87 | 19.5 | -27.4 | NP_778218 | 5' arm 3' arm | ||
17695 | - | 1824 | 90 | 20 | -27.1 | NP_778217 | 5' arm 3' arm | ||
17696 | - | 3908 | 86 | 21 | -27.8 | NP_778218 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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