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GenBank Identifier | RefSeq Acc. | Name |
30018252 | NC_004725.1 | Cucumber Bulgarian virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
20971 | + | 1260 | 89 | 22.5 | -23 | NP_835253 | 5' arm 3' arm | ||
20970 | + | 441 | 90 | 23 | -22.5 | NP_835254 | 5' arm 3' arm | ||
20972 | + | 1572 | 85 | 20.5 | -21 | NP_835253 | 5' arm 3' arm | ||
20974 | - | 3574 | 89 | 19 | -20.97 | NP_835255 | 5' arm 3' arm | ||
20973 | + | 1961 | 90 | 19.5 | -19.9 | NP_835253 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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