miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
30039743 NC_004736.1 Vibrio cholerae phage VGJphi virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21030 + 886 89 20 -23.6 NP_835472 5' arm      3' arm
21031 + 1716 88 20.5 -20.8 NP_835475 5' arm      3' arm
21032 - 106 90 24 -29.2 NP_835472 5' arm      3' arm
21033 - 2680 90 25.5 -22.9 NP_835477 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.