miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21162	+	815	85	19.5	-21.8			5' arm      3' arm
21163	+	7051	90	24	-24	NP_848273		5' arm      3' arm
21164	+	11190	90	20.5	-22.6	NP_848279		5' arm      3' arm
21165	+	12492	87	19	-29.1	NP_848283		5' arm      3' arm
21166	+	14427	90	21.5	-21.9	NP_848283		5' arm      3' arm
21167	+	18898	90	22.5	-25.4	NP_848294		5' arm      3' arm
21168	+	19364	89	20	-21.4	NP_848294		5' arm      3' arm
21169	+	21761	86	19	-28.9			5' arm      3' arm
21170	+	23026	89	19	-23.6	NP_848299		5' arm      3' arm
21171	+	24829	90	24.5	-25.83			5' arm      3' arm
21172	+	24974	83	21.5	-20.7	NP_848300		5' arm      3' arm
21173	+	28242	89	20	-20.2	NP_848303		5' arm      3' arm
21174	+	28645	90	19.5	-22.9	NP_848303		5' arm      3' arm
21175	+	31446	83	19	-25.5	NP_848303		5' arm      3' arm
21176	+	32139	90	19	-20.9			5' arm      3' arm
21177	+	34558	90	21.5	-24.6	NP_848307		5' arm      3' arm
21178	+	34757	81	21.5	-21.2	NP_848308		5' arm      3' arm
21179	-	9446	89	24.5	-21.9	NP_848278		5' arm      3' arm
21180	-	22295	85	21	-21.3	NP_848298		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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