miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
25140187 NC_004422.1 Youcai mosaic virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17413 + 5684 90 19.5 -21.3 NP_740759 5' arm      3' arm
17414 - 168 90 23 -25.6 NP_740757 5' arm      3' arm
17415 - 6020 87 20 -24.1 NP_740759 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.