miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
30090015 NC_002160.2 Barley yellow dwarf virus-PAS

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8405 - 564 89 21.5 -23.3 NP_037636 5' arm      3' arm
8407 - 5482 89 21 -26.2 5' arm      3' arm
8406 - 1821 88 21 -23.1 NP_037635 5' arm      3' arm
8404 + 1092 87 19 -23.9 NP_037636 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.