miRNA display CGI


Results 1 - 10 of 10 are showing below:
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GenBank Identifier RefSeq Acc. Name
30089981 NC_002198.2 Cereal yellow dwarf virus-RPS

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8600 - 4867 89 20 -27.4 NP_054687 5' arm      3' arm
8599 - 4316 89 21.5 -26.9 NP_054687 5' arm      3' arm
8597 - 415 90 21 -24.3 NP_054685 5' arm      3' arm
8596 + 5214 90 21 -24.2 NP_054687 5' arm      3' arm
8601 - 5302 86 20 -24.2 NP_054687 5' arm      3' arm
8592 + 90 88 21 -23.8 NP_054684 5' arm      3' arm
8595 + 5108 89 21 -23.7 NP_054687 5' arm      3' arm
8593 + 1751 90 19.5 -21 NP_054685 5' arm      3' arm
8594 + 2449 90 23 -20.6 NP_054685 5' arm      3' arm
8598 - 2392 89 19 -19.8 NP_054685 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.