miRNA display CGI


Results 1 - 12 of 12 are showing below:
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GenBank Identifier RefSeq Acc. Name
31543997 NC_004827.1 Bacteriophage Aaphi23

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21798 + 5385 90 27 -20.3 YP_003951 5' arm      3' arm
21799 + 10546 90 23.5 -22.7 NP_852737 5' arm      3' arm
21800 + 17990 88 26 -22.5 NP_852747 5' arm      3' arm
21801 + 24555 89 23 -20.9 NP_852755 5' arm      3' arm
21802 + 33284 90 21.5 -23.3 YP_003960 5' arm      3' arm
21803 + 40258 87 20.5 -24 NP_852777 5' arm      3' arm
21804 - 6366 89 19.5 -21.2 5' arm      3' arm
21805 - 12062 90 22.5 -22.6 NP_852739 5' arm      3' arm
21806 - 32935 90 22 -23.8 YP_003960 5' arm      3' arm
21807 - 36676 88 20 -29 5' arm      3' arm
21808 - 40357 86 20 -25.5 NP_852777 5' arm      3' arm
21809 - 42715 90 19.5 -25.3 YP_003961 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.