Results 1 - 12 of 12 are showing below:
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GenBank Identifier | RefSeq Acc. | Name |
31543997 | NC_004827.1 | Bacteriophage Aaphi23 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
21798 | + | 5385 | 90 | 27 | -20.3 | YP_003951 | 5' arm 3' arm | ||
21799 | + | 10546 | 90 | 23.5 | -22.7 | NP_852737 | 5' arm 3' arm | ||
21800 | + | 17990 | 88 | 26 | -22.5 | NP_852747 | 5' arm 3' arm | ||
21801 | + | 24555 | 89 | 23 | -20.9 | NP_852755 | 5' arm 3' arm | ||
21802 | + | 33284 | 90 | 21.5 | -23.3 | YP_003960 | 5' arm 3' arm | ||
21803 | + | 40258 | 87 | 20.5 | -24 | NP_852777 | 5' arm 3' arm | ||
21804 | - | 6366 | 89 | 19.5 | -21.2 | 5' arm 3' arm | |||
21805 | - | 12062 | 90 | 22.5 | -22.6 | NP_852739 | 5' arm 3' arm | ||
21806 | - | 32935 | 90 | 22 | -23.8 | YP_003960 | 5' arm 3' arm | ||
21807 | - | 36676 | 88 | 20 | -29 | 5' arm 3' arm | |||
21808 | - | 40357 | 86 | 20 | -25.5 | NP_852777 | 5' arm 3' arm | ||
21809 | - | 42715 | 90 | 19.5 | -25.3 | YP_003961 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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