miRNA display CGI


Results 1 - 20 of 62 are showing below:
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GenBank Identifier RefSeq Acc. Name
32128412 NC_004902.1 Xanthomonas oryzae bacteriophage Xp10

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21864 + 19237 87 22 -28.7 5' arm      3' arm
21895 - 35050 82 21.5 -23.2 5' arm      3' arm
21901 - 42787 89 23.5 -22.8 5' arm      3' arm
21856 + 9486 90 21 -30.3 5' arm      3' arm
21865 + 23521 88 19 -25.3 5' arm      3' arm
21880 - 11106 89 21.5 -24 5' arm      3' arm
21886 - 25135 90 26 -25.2 5' arm      3' arm
21840 + 197 88 21.5 -21.1 NP_858948 5' arm      3' arm
21873 - 622 86 20 -23 NP_858949 5' arm      3' arm
21841 + 830 90 20.5 -22.6 NP_858950 5' arm      3' arm
21874 - 1349 89 22 -28.2 NP_858951 5' arm      3' arm
21842 + 1368 85 19.5 -24.7 NP_858951 5' arm      3' arm
21843 + 1672 89 20 -22.2 NP_858953 5' arm      3' arm
21876 - 3131 87 21 -19.9 NP_858953 5' arm      3' arm
21875 - 1740 86 21.5 -24.3 NP_858953 5' arm      3' arm
21844 + 4182 87 19.5 -21.4 NP_858954 5' arm      3' arm
21845 + 5542 90 24 -25.8 NP_858956 5' arm      3' arm
21849 + 6464 86 20.5 -21.1 NP_858956 5' arm      3' arm
21846 + 6082 90 21.5 -22.4 NP_858956 5' arm      3' arm
21877 - 6382 89 19.5 -27.3 NP_858956 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.