miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21854	+	8268	89	22.5	-30.5	NP_858961		5' arm      3' arm
21856	+	9486	90	21	-30.3			5' arm      3' arm
21885	-	24408	90	21	-29.2	NP_858978		5' arm      3' arm
21864	+	19237	87	22	-28.7			5' arm      3' arm
21874	-	1349	89	22	-28.2	NP_858951		5' arm      3' arm
21848	+	6297	84	22	-28	NP_858956		5' arm      3' arm
21877	-	6382	89	19.5	-27.3	NP_858956		5' arm      3' arm
21891	-	29950	88	19	-27	NP_858984		5' arm      3' arm
21858	+	13052	88	21	-27	NP_858965		5' arm      3' arm
21894	-	34680	88	19.5	-26.6	NP_858988		5' arm      3' arm
21857	+	11016	89	20	-26.2	NP_858965		5' arm      3' arm
21845	+	5542	90	24	-25.8	NP_858956		5' arm      3' arm
21899	-	39572	86	19.5	-25.79	NP_858997		5' arm      3' arm
21879	-	10770	87	20.5	-25.3	NP_858965		5' arm      3' arm
21865	+	23521	88	19	-25.3			5' arm      3' arm
21886	-	25135	90	26	-25.2			5' arm      3' arm
21842	+	1368	85	19.5	-24.7	NP_858951		5' arm      3' arm
21863	+	18567	89	23	-24.7	NP_858969		5' arm      3' arm
21855	+	8360	90	22	-24.6	NP_858961		5' arm      3' arm
21862	+	17973	90	24	-24.5	NP_858969		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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