miRNA display CGI


Results 1 - 20 of 62 are showing below:
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GenBank Identifier RefSeq Acc. Name
32128412 NC_004902.1 Xanthomonas oryzae bacteriophage Xp10

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21861 + 17547 88 19 -20.9 NP_858969 5' arm      3' arm
21852 + 7634 90 19 -21.5 NP_858959 5' arm      3' arm
21889 - 27226 89 19 -24.2 NP_858979 5' arm      3' arm
21865 + 23521 88 19 -25.3 5' arm      3' arm
21891 - 29950 88 19 -27 NP_858984 5' arm      3' arm
21851 + 6892 90 19.5 -19.5 NP_858957 5' arm      3' arm
21877 - 6382 89 19.5 -27.3 NP_858956 5' arm      3' arm
21881 - 18317 89 19.5 -20.8 NP_858969 5' arm      3' arm
21899 - 39572 86 19.5 -25.79 NP_858997 5' arm      3' arm
21894 - 34680 88 19.5 -26.6 NP_858988 5' arm      3' arm
21842 + 1368 85 19.5 -24.7 NP_858951 5' arm      3' arm
21866 + 24319 90 19.5 -23.6 NP_858978 5' arm      3' arm
21893 - 33505 90 19.5 -20.2 NP_858986 5' arm      3' arm
21860 + 17050 87 19.5 -20 NP_858969 5' arm      3' arm
21844 + 4182 87 19.5 -21.4 NP_858954 5' arm      3' arm
21857 + 11016 89 20 -26.2 NP_858965 5' arm      3' arm
21900 - 42010 88 20 -23.4 NP_859004 5' arm      3' arm
21890 - 27805 83 20 -24.4 NP_858980 5' arm      3' arm
21843 + 1672 89 20 -22.2 NP_858953 5' arm      3' arm
21869 + 28763 90 20 -19.5 NP_858982 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.