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GenBank Identifier | RefSeq Acc. | Name |
48305606 | NC_010624.1 | Sapovirus Mc10 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
33646 | + | 1089 | 88 | 20 | -24.5 | YP_022762 | 5' arm 3' arm | ||
33647 | + | 5065 | 83 | 19.5 | -32.2 | YP_022762 | 5' arm 3' arm | ||
33648 | + | 5315 | 90 | 19.5 | -24.3 | YP_022762 | 5' arm 3' arm | ||
33649 | + | 5865 | 89 | 23 | -29.2 | YP_022762 | 5' arm 3' arm | ||
33650 | - | 5005 | 87 | 21.5 | -28.8 | YP_022762 | 5' arm 3' arm | ||
33651 | - | 5149 | 90 | 19.5 | -30.9 | YP_022762 | 5' arm 3' arm | ||
33652 | - | 5262 | 90 | 22.5 | -19.6 | YP_022762 | 5' arm 3' arm | ||
33653 | - | 5953 | 85 | 20 | -27.8 | YP_022762 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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