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| GenBank Identifier | RefSeq Acc. | Name |
| 38640309 | NC_005262.1 | Burkholderia cepacia phage Bcep22 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24102 | - | 59673 | 88 | 22.5 | -34.1 | NP_944303 | 5' arm 3' arm | ||
| 23956 | + | 52997 | 90 | 19 | -34 | NP_944303 | 5' arm 3' arm | ||
| 23953 | + | 50864 | 89 | 19.5 | -33.9 | NP_944303 | 5' arm 3' arm | ||
| 24000 | - | 19901 | 85 | 20 | -33.8 | NP_944262 | 5' arm 3' arm | ||
| 24026 | - | 29868 | 89 | 22 | -32.7 | NP_944280 | 5' arm 3' arm | ||
| 23959 | + | 55680 | 85 | 19.5 | -32.7 | NP_944303 | 5' arm 3' arm | ||
| 24060 | - | 46505 | 80 | 19.5 | -32.5 | NP_944302 | 5' arm 3' arm | ||
| 23964 | + | 59748 | 89 | 22 | -32.5 | NP_944303 | 5' arm 3' arm | ||
| 24076 | - | 53435 | 89 | 22.5 | -32.2 | NP_944303 | 5' arm 3' arm | ||
| 23978 | - | 7245 | 89 | 20.5 | -31.8 | 5' arm 3' arm | |||
| 23951 | + | 49386 | 88 | 20.5 | -31 | NP_944303 | 5' arm 3' arm | ||
| 23995 | - | 16120 | 88 | 23.5 | -30.8 | NP_944257 | 5' arm 3' arm | ||
| 23884 | + | 8016 | 89 | 22 | -30.5 | NP_944242 | 5' arm 3' arm | ||
| 23982 | - | 10760 | 90 | 22 | -30.4 | 5' arm 3' arm | |||
| 24095 | - | 58076 | 86 | 19 | -30.4 | NP_944303 | 5' arm 3' arm | ||
| 23994 | - | 15941 | 90 | 21.5 | -30.1 | NP_944257 | 5' arm 3' arm | ||
| 23879 | + | 6617 | 87 | 19.5 | -30.1 | NP_944240 | 5' arm 3' arm | ||
| 24090 | - | 56802 | 87 | 19.5 | -30 | NP_944303 | 5' arm 3' arm | ||
| 23962 | + | 57821 | 89 | 22 | -30 | NP_944303 | 5' arm 3' arm | ||
| 23912 | + | 26062 | 87 | 21 | -29.9 | NP_944278 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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