miRNA display CGI


Results 1 - 20 of 27 are showing below:
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GenBank Identifier RefSeq Acc. Name
27228471 NC_004453.1 Tree shrew adenovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17436 + 374 90 24 -22.7 YP_068055 5' arm      3' arm
17450 + 33106 87 21 -22.7 YP_068090 5' arm      3' arm
17449 + 25572 87 21 -22.3 YP_068077 5' arm      3' arm
17448 + 21807 89 19 -21.8 YP_068072 5' arm      3' arm
17444 + 18836 90 19.5 -24.2 YP_068070 5' arm      3' arm
17445 + 18967 90 20.5 -19.8 YP_068070 5' arm      3' arm
17446 + 19456 86 21.5 -26.9 YP_068071 5' arm      3' arm
17447 + 20247 85 22.5 -25.6 YP_068071 5' arm      3' arm
17443 + 17130 90 20 -21.8 YP_068069 5' arm      3' arm
17437 + 2443 90 22 -20 YP_068057 5' arm      3' arm
17438 + 3638 90 22 -21.8 YP_068059 5' arm      3' arm
17440 + 7292 87 22 -23.2 YP_068060 5' arm      3' arm
17439 + 6654 90 19.5 -19.56 YP_068060 5' arm      3' arm
17441 + 10008 90 21 -21.9 YP_068062 5' arm      3' arm
17442 + 10099 89 19.5 -20.6 YP_068062 5' arm      3' arm
17451 - 8282 90 24 -30.3 YP_068061 5' arm      3' arm
17461 - 25235 87 20.5 -20.5 YP_068077 5' arm      3' arm
17460 - 20333 89 21 -27.6 YP_068071 5' arm      3' arm
17455 - 16461 90 22.5 -24.5 YP_068069 5' arm      3' arm
17459 - 19328 90 21 -21 YP_068070 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.