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GenBank Identifier | RefSeq Acc. | Name |
60677687 | NC_006875.1 | Calicivirus isolate TCG |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
31596 | + | 1380 | 87 | 20 | -22.4 | YP_213937 | 5' arm 3' arm | ||
31597 | + | 4013 | 87 | 20 | -24.2 | YP_213937 | 5' arm 3' arm | ||
31598 | + | 5352 | 89 | 23 | -20.4 | YP_213937 | 5' arm 3' arm | ||
31599 | - | 291 | 87 | 19.5 | -27.1 | YP_213937 | 5' arm 3' arm | ||
31600 | - | 2207 | 90 | 21.5 | -20.4 | YP_213937 | 5' arm 3' arm | ||
31601 | - | 2831 | 90 | 21.5 | -20.8 | YP_213937 | 5' arm 3' arm | ||
31602 | - | 3501 | 87 | 19 | -27.7 | YP_213937 | 5' arm 3' arm | ||
31603 | - | 5949 | 89 | 21 | -20.06 | YP_213937 | 5' arm 3' arm | ||
31604 | - | 6158 | 90 | 21.5 | -24 | YP_213937 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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