miRNA display CGI


Results 1 - 20 of 221 are showing below:
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GenBank Identifier RefSeq Acc. Name
47777280 NC_005263.2 Burkholderia cenocepacia phage Bcep1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
24330 - 47599 89 20 -21.1 NP_944377 5' arm      3' arm
24329 - 47464 85 20 -23.5 NP_944377 5' arm      3' arm
24328 - 46659 89 21.5 -24.1 NP_944376 5' arm      3' arm
24327 - 46545 90 23 -21.9 NP_944376 5' arm      3' arm
24326 - 45553 83 22.5 -28.4 NP_944374 5' arm      3' arm
24325 - 45234 87 21 -24.2 NP_944374 5' arm      3' arm
24324 - 44842 90 24 -27.8 NP_944374 5' arm      3' arm
24323 - 44636 90 22.5 -22.1 NP_944374 5' arm      3' arm
24322 - 44472 84 20 -22.2 NP_944374 5' arm      3' arm
24321 - 44343 89 21.5 -20 NP_944374 5' arm      3' arm
24320 - 42991 89 23 -25.6 NP_944370 5' arm      3' arm
24319 - 42393 89 19 -20.7 NP_944368 5' arm      3' arm
24318 - 42241 87 19.5 -24.2 NP_944368 5' arm      3' arm
24317 - 40945 90 20 -19.9 NP_944368 5' arm      3' arm
24316 - 40847 90 21 -22.9 NP_944368 5' arm      3' arm
24315 - 40705 89 21.5 -21.6 5' arm      3' arm
24314 - 40196 87 23.5 -21 NP_944366 5' arm      3' arm
24313 - 39276 90 22.5 -23.7 NP_944363 5' arm      3' arm
24312 - 39073 89 24.5 -21.7 NP_944363 5' arm      3' arm
24311 - 38944 88 22 -22.8 NP_944363 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.