miRNA display CGI


Results 1 - 20 of 221 are showing below:
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GenBank Identifier RefSeq Acc. Name
47777280 NC_005263.2 Burkholderia cenocepacia phage Bcep1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
24315 - 40705 89 21.5 -21.6 5' arm      3' arm
24142 + 11137 88 20.5 -27.8 5' arm      3' arm
24160 + 17906 87 23 -31.9 5' arm      3' arm
24304 - 33697 89 20 -24 5' arm      3' arm
24125 + 5694 89 21 -30.9 5' arm      3' arm
24262 - 11223 89 20.5 -32.5 5' arm      3' arm
24189 + 30050 90 21 -29.6 5' arm      3' arm
24136 + 9394 90 26 -29.3 5' arm      3' arm
24243 - 5782 87 20 -28.9 5' arm      3' arm
24113 + 987 88 20.5 -31.5 5' arm      3' arm
24230 - 732 90 19 -20.3 NP_944309 5' arm      3' arm
24111 + 239 90 22 -20.2 NP_944309 5' arm      3' arm
24110 + 44 90 21.5 -23.7 NP_944309 5' arm      3' arm
24112 + 678 86 20.5 -27.2 NP_944309 5' arm      3' arm
24231 - 852 87 21 -31.4 NP_944309 5' arm      3' arm
24114 + 1636 90 24.5 -26.9 NP_944311 5' arm      3' arm
24116 + 2590 83 21 -20.3 NP_944312 5' arm      3' arm
24234 - 3082 90 19.5 -22.1 NP_944312 5' arm      3' arm
24233 - 2892 87 21.5 -20.7 NP_944312 5' arm      3' arm
24235 - 3262 89 21 -34.7 NP_944312 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.