miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24169	+	23257	89	20.5	-34.7	NP_944342		5' arm      3' arm
24235	-	3262	89	21	-34.7	NP_944312		5' arm      3' arm
24280	-	19670	90	22.5	-34	NP_944332		5' arm      3' arm
24263	-	12030	85	23	-33.6	NP_944325		5' arm      3' arm
24164	+	19582	88	19.5	-32.8	NP_944332		5' arm      3' arm
24296	-	28799	81	21	-32.7	NP_944349		5' arm      3' arm
24258	-	9785	89	20.5	-32.6	NP_944323		5' arm      3' arm
24262	-	11223	89	20.5	-32.5			5' arm      3' arm
24244	-	5917	89	24.5	-32.5	NP_944318		5' arm      3' arm
24284	-	22008	87	20.5	-32.4	NP_944337		5' arm      3' arm
24160	+	17906	87	23	-31.9			5' arm      3' arm
24238	-	4366	89	22	-31.6	NP_944314		5' arm      3' arm
24113	+	987	88	20.5	-31.5			5' arm      3' arm
24231	-	852	87	21	-31.4	NP_944309		5' arm      3' arm
24166	+	20938	90	23	-31.2	NP_944336		5' arm      3' arm
24125	+	5694	89	21	-30.9			5' arm      3' arm
24184	+	28073	90	23	-30.9	NP_944349		5' arm      3' arm
24147	+	11948	81	19	-30.7	NP_944325		5' arm      3' arm
24146	+	11854	87	23	-29.9	NP_944325		5' arm      3' arm
24189	+	30050	90	21	-29.6			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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