miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24131	+	8066	88	20.5	-27	NP_944321		5' arm      3' arm
24136	+	9394	90	26	-29.3			5' arm      3' arm
24134	+	8749	90	23.5	-22.3	NP_944321		5' arm      3' arm
24135	+	9263	90	23	-22.2	NP_944322		5' arm      3' arm
24133	+	8587	87	22	-20.9	NP_944321		5' arm      3' arm
24125	+	5694	89	21	-30.9			5' arm      3' arm
24124	+	5598	90	20.5	-23.4	NP_944317		5' arm      3' arm
24128	+	6954	89	20.5	-21.7	NP_944319		5' arm      3' arm
24130	+	7420	90	20.5	-29.5	NP_944320		5' arm      3' arm
24117	+	3512	90	20	-26.9	NP_944313		5' arm      3' arm
24120	+	4143	89	20.5	-23.9	NP_944314		5' arm      3' arm
24115	+	2042	89	20.5	-23.5	NP_944312		5' arm      3' arm
24114	+	1636	90	24.5	-26.9	NP_944311		5' arm      3' arm
24119	+	3876	90	23	-23	NP_944314		5' arm      3' arm
24121	+	4647	89	22.5	-25.5	NP_944315		5' arm      3' arm
24111	+	239	90	22	-20.2	NP_944309		5' arm      3' arm
24110	+	44	90	21.5	-23.7	NP_944309		5' arm      3' arm
24116	+	2590	83	21	-20.3	NP_944312		5' arm      3' arm
24112	+	678	86	20.5	-27.2	NP_944309		5' arm      3' arm
24113	+	987	88	20.5	-31.5			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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