miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
48843625 NC_005906.1 Neodiprion lecontei NPV

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
28332 - 1042 84 21.5 -28.7 YP_025199 5' arm      3' arm
28330 + 957 89 26 -28.5 YP_025199 5' arm      3' arm
28333 - 32500 90 28 -28.9 YP_025235 5' arm      3' arm
28331 + 32411 90 31 -26.6 YP_025199 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.