miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24846	+	19374	86	22	-22.8	NP_945050		5' arm      3' arm
24847	+	19796	88	20	-29.8	NP_945051		5' arm      3' arm
24848	+	20827	89	20	-20.5	NP_945053		5' arm      3' arm
24849	+	21151	90	19.5	-27.2	NP_945054		5' arm      3' arm
24850	+	23195	89	21	-23.1	NP_945058		5' arm      3' arm
24851	+	23607	87	22	-26.3	NP_945058		5' arm      3' arm
24852	+	23900	87	20.5	-25.82	NP_945058		5' arm      3' arm
24853	+	24817	90	19.5	-20.3	NP_945060		5' arm      3' arm
24854	+	25017	90	22.5	-22.8	NP_945060		5' arm      3' arm
24855	+	25546	89	22.5	-23.4	NP_945061		5' arm      3' arm
24856	+	25687	87	20.5	-19.9	NP_945061		5' arm      3' arm
24857	+	26930	90	22.5	-25.5	NP_945062		5' arm      3' arm
24858	+	27212	90	21	-21.5	NP_945062		5' arm      3' arm
24859	+	27494	90	20.5	-22.2	NP_945063		5' arm      3' arm
24860	+	30265	89	21	-27.5	NP_945067		5' arm      3' arm
24861	+	30427	88	26.5	-21.7	NP_945068		5' arm      3' arm
24862	+	30680	90	20	-22.6	NP_945069		5' arm      3' arm
24863	+	30775	89	19	-22.9	NP_945069		5' arm      3' arm
24864	+	31289	87	19.5	-29	NP_945069		5' arm      3' arm
24865	+	31599	87	20.5	-21.1			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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