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GenBank Identifier | RefSeq Acc. | Name |
56692628 | NC_006566.1 | Fragaria chiloensis latent virus RNA 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
31284 | + | 42 | 81 | 20.5 | -24.8 | YP_164801 | 5' arm 3' arm | ||
31285 | + | 262 | 87 | 23.5 | -24.9 | YP_164801 | 5' arm 3' arm | ||
31286 | + | 1662 | 89 | 23 | -27.6 | YP_164801 | 5' arm 3' arm | ||
31287 | - | 124 | 87 | 19.5 | -28.4 | YP_164801 | 5' arm 3' arm | ||
31288 | + | 490 | 89 | 20 | -30.6 | YP_164802 | 5' arm 3' arm | ||
31289 | + | 739 | 87 | 24 | -23.5 | YP_164804 | 5' arm 3' arm | ||
31290 | + | 1967 | 88 | 22.5 | -27.7 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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