miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27370	-	20565	90	19	-24.2	YP_006601		5' arm      3' arm
27353	+	32499	89	19	-27	YP_006610		5' arm      3' arm
27382	-	45241	86	19	-20.1	YP_006631		5' arm      3' arm
27379	-	36115	90	19	-23.3	YP_006615		5' arm      3' arm
27387	-	48652	90	19	-30.7			5' arm      3' arm
27339	+	9244	81	19	-25.3	YP_006595		5' arm      3' arm
27386	-	47920	86	19	-25.1	YP_006635		5' arm      3' arm
27384	-	46388	82	19	-19.7	YP_006632		5' arm      3' arm
27366	-	13399	88	19	-22.9	YP_006597		5' arm      3' arm
27378	-	35343	90	19	-21.86	YP_006615		5' arm      3' arm
27343	+	16544	89	19	-27.2	YP_006601		5' arm      3' arm
27381	-	40104	89	19.5	-19.9	YP_006618		5' arm      3' arm
27349	+	25356	88	19.5	-20.5	YP_006601		5' arm      3' arm
27342	+	16367	88	19.5	-24.2	YP_006601		5' arm      3' arm
27383	-	45595	86	19.5	-28.9			5' arm      3' arm
27358	-	2044	88	19.5	-21.3	YP_006582		5' arm      3' arm
27357	+	38380	88	19.5	-23.7			5' arm      3' arm
27334	+	3148	90	19.5	-23.9	YP_006584		5' arm      3' arm
27333	+	2580	88	19.5	-30.3	YP_006584		5' arm      3' arm
27332	+	2271	88	19.5	-28.6	YP_006583		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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