miRNA display CGI


Results 1 - 20 of 48 are showing below:
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GenBank Identifier RefSeq Acc. Name
48843719 NC_005902.1 Lymphocystis disease virus - isolate China

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
28274 - 11209 90 22.5 -19.4 5' arm      3' arm
28258 + 65808 88 30 -19.5 5' arm      3' arm
28285 - 81255 89 26 -20.31 5' arm      3' arm
28278 - 52971 90 25.5 -21.02 5' arm      3' arm
28253 + 8281 89 26 -21.3 5' arm      3' arm
28279 - 58736 89 27 -21.64 YP_073584 5' arm      3' arm
28282 - 78900 90 26.5 -22.2 5' arm      3' arm
28271 + 175183 89 28.5 -22.3 5' arm      3' arm
28252 + 6243 90 29.5 -22.5 5' arm      3' arm
28291 - 154811 81 24.5 -22.7 5' arm      3' arm
28296 - 173425 85 28.5 -22.8 5' arm      3' arm
28290 - 148462 90 23 -23.2 5' arm      3' arm
28293 - 162150 79 28 -23.6 5' arm      3' arm
28251 + 3369 86 24.5 -23.6 5' arm      3' arm
28280 - 65896 90 28 -23.8 5' arm      3' arm
28265 + 127588 90 28.5 -23.9 5' arm      3' arm
28288 - 127234 88 22 -24.4 5' arm      3' arm
28264 + 125087 90 25.5 -24.5 YP_073671 5' arm      3' arm
28289 - 127676 89 30 -24.7 5' arm      3' arm
28283 - 79584 90 31 -24.8 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.