miRNA display CGI


Results 1 - 20 of 48 are showing below:
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GenBank Identifier RefSeq Acc. Name
48843719 NC_005902.1 Lymphocystis disease virus - isolate China

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
28273 - 1219 89 30 -34.3 5' arm      3' arm
28263 + 113227 90 21 -27.4 YP_073659 5' arm      3' arm
28262 + 113066 89 20 -26.3 YP_073659 5' arm      3' arm
28264 + 125087 90 25.5 -24.5 YP_073671 5' arm      3' arm
28265 + 127588 90 28.5 -23.9 5' arm      3' arm
28266 + 143613 85 24 -26.3 5' arm      3' arm
28267 + 155061 81 24.5 -27.26 YP_073703 5' arm      3' arm
28268 + 161992 90 28.5 -27.7 5' arm      3' arm
28270 + 170798 89 34.5 -27.9 YP_073725 5' arm      3' arm
28261 + 80803 90 28 -29.8 YP_073614 5' arm      3' arm
28260 + 79495 90 38 -29.04 5' arm      3' arm
28259 + 71741 89 26 -28.9 YP_073602 5' arm      3' arm
28251 + 3369 86 24.5 -23.6 5' arm      3' arm
28252 + 6243 90 29.5 -22.5 5' arm      3' arm
28253 + 8281 89 26 -21.3 5' arm      3' arm
28254 + 13184 90 26.5 -37.04 5' arm      3' arm
28255 + 28970 83 23 -27.3 5' arm      3' arm
28256 + 54382 86 29 -34.1 5' arm      3' arm
28257 + 58370 89 25.5 -26.3 5' arm      3' arm
28258 + 65808 88 30 -19.5 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.