miRNA display CGI


Results 1 - 20 of 36 are showing below:
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GenBank Identifier RefSeq Acc. Name
48696638 NC_005879.1 Vibriophage VP2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
27503 + 286 88 27 -26.6 5' arm      3' arm
27515 + 23493 89 21.5 -23.9 5' arm      3' arm
27516 + 24629 90 19.5 -25.9 5' arm      3' arm
27519 + 33460 87 21 -25.9 5' arm      3' arm
27532 - 23021 87 19 -25.4 5' arm      3' arm
27536 - 36921 87 19 -19.6 5' arm      3' arm
27523 - 1653 90 24.5 -24 YP_024418 5' arm      3' arm
27504 + 1692 87 20 -23.8 YP_024418 5' arm      3' arm
27525 - 3614 89 20 -25.6 YP_024419 5' arm      3' arm
27524 - 3099 79 21 -20.3 YP_024419 5' arm      3' arm
27505 + 3667 86 21 -22.4 YP_024419 5' arm      3' arm
27508 + 8692 85 20.5 -24.2 YP_024420 5' arm      3' arm
27510 + 10357 90 19.5 -19.5 YP_024421 5' arm      3' arm
27527 - 9833 87 20.5 -19.7 YP_024421 5' arm      3' arm
27511 + 10525 90 24 -23.7 YP_024421 5' arm      3' arm
27509 + 9748 88 19 -22.3 YP_024421 5' arm      3' arm
27512 + 12392 87 21 -22.1 YP_024422 5' arm      3' arm
27528 - 12480 90 23 -26.1 YP_024422 5' arm      3' arm
27529 - 18623 88 23.5 -29.3 YP_024423 5' arm      3' arm
27530 - 20578 89 19 -20 YP_024425 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.