miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27503	+	286	88	27	-26.6			5' arm      3' arm
27514	+	14595	86	21	-27	YP_052985		5' arm      3' arm
27515	+	23493	89	21.5	-23.9			5' arm      3' arm
27517	+	26393	90	21.5	-23.1	YP_024428		5' arm      3' arm
27516	+	24629	90	19.5	-25.9			5' arm      3' arm
27518	+	28937	90	23.5	-22.8	YP_024430		5' arm      3' arm
27519	+	33460	87	21	-25.9			5' arm      3' arm
27520	+	34734	89	20	-20.1	YP_052995		5' arm      3' arm
27521	+	39218	87	23.5	-32.1	YP_053005		5' arm      3' arm
27509	+	9748	88	19	-22.3	YP_024421		5' arm      3' arm
27510	+	10357	90	19.5	-19.5	YP_024421		5' arm      3' arm
27505	+	3667	86	21	-22.4	YP_024419		5' arm      3' arm
27504	+	1692	87	20	-23.8	YP_024418		5' arm      3' arm
27507	+	8405	85	21	-20.3	YP_052982		5' arm      3' arm
27506	+	7405	87	20.5	-26	YP_052981		5' arm      3' arm
27508	+	8692	85	20.5	-24.2	YP_024420		5' arm      3' arm
27511	+	10525	90	24	-23.7	YP_024421		5' arm      3' arm
27513	+	13553	89	22.5	-25.14	YP_052984		5' arm      3' arm
27512	+	12392	87	21	-22.1	YP_024422		5' arm      3' arm
27524	-	3099	79	21	-20.3	YP_024419		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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