miRNA display CGI


Results 1 - 20 of 34 are showing below:
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GenBank Identifier RefSeq Acc. Name
48696682 NC_005891.1 Vibriophage VP5

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
28192 + 285 88 25.5 -22.7 5' arm      3' arm
28193 + 676 85 19.5 -23.44 YP_053007 5' arm      3' arm
28194 + 1691 87 20 -23.8 YP_024977 5' arm      3' arm
28195 + 7404 87 20.5 -26 YP_053013 5' arm      3' arm
28196 + 8404 85 21 -20.3 YP_053014 5' arm      3' arm
28197 + 8691 85 20.5 -24.2 YP_024979 5' arm      3' arm
28198 + 9747 88 19 -22.3 YP_024980 5' arm      3' arm
28199 + 10525 88 20 -24.1 YP_024980 5' arm      3' arm
28200 + 10899 89 23 -21.2 YP_024980 5' arm      3' arm
28201 + 14591 86 21 -27 YP_053018 5' arm      3' arm
28202 + 23442 89 21.5 -23.9 YP_053024 5' arm      3' arm
28203 + 24578 90 19.5 -25.9 5' arm      3' arm
28204 + 26342 90 21.5 -23.1 YP_024985 5' arm      3' arm
28205 + 27631 88 23.5 -21.5 YP_024986 5' arm      3' arm
28206 + 28887 89 22.5 -22.8 YP_024987 5' arm      3' arm
28207 + 34683 89 20 -20.1 5' arm      3' arm
28208 + 34966 86 21 -20.5 YP_053032 5' arm      3' arm
28209 + 39151 87 23 -30.9 5' arm      3' arm
28210 - 960 89 23.5 -20.5 YP_053007 5' arm      3' arm
28211 - 1652 90 24.5 -24 YP_024977 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.