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| GenBank Identifier | RefSeq Acc. | Name |
| 11038431 | NC_001875.2 | Orgyia pseudotsugata multicapsid nucleopolyhedrovirus |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 6756 | + | 30508 | 80 | 22 | -21.6 | 5' arm 3' arm | |||
| 7027 | - | 130701 | 88 | 25 | -22.3 | 5' arm 3' arm | |||
| 6872 | + | 128466 | 88 | 22.5 | -25 | 5' arm 3' arm | |||
| 7023 | - | 130150 | 90 | 24.5 | -23.8 | 5' arm 3' arm | |||
| 6859 | + | 114844 | 90 | 24.5 | -21.2 | 5' arm 3' arm | |||
| 7024 | - | 130279 | 90 | 24.5 | -23.61 | 5' arm 3' arm | |||
| 6858 | + | 114745 | 90 | 20 | -22.1 | 5' arm 3' arm | |||
| 6837 | + | 92791 | 90 | 22.5 | -26.9 | 5' arm 3' arm | |||
| 6746 | + | 24044 | 89 | 22 | -20.91 | 5' arm 3' arm | |||
| 6863 | + | 117729 | 88 | 23 | -19.7 | 5' arm 3' arm | |||
| 7026 | - | 130539 | 88 | 23.5 | -22.3 | 5' arm 3' arm | |||
| 7025 | - | 130407 | 88 | 23 | -19.4 | 5' arm 3' arm | |||
| 6919 | - | 34380 | 88 | 21.5 | -32.1 | 5' arm 3' arm | |||
| 6962 | - | 70977 | 89 | 23.5 | -23.9 | 5' arm 3' arm | |||
| 6951 | - | 62013 | 89 | 21 | -29.1 | 5' arm 3' arm | |||
| 6985 | - | 95380 | 88 | 22.5 | -23.6 | 5' arm 3' arm | |||
| 6996 | - | 101469 | 90 | 26 | -22.6 | 5' arm 3' arm | |||
| 6995 | - | 101337 | 90 | 26 | -22.6 | 5' arm 3' arm | |||
| 6997 | - | 101601 | 90 | 26 | -22.6 | 5' arm 3' arm | |||
| 6998 | - | 101733 | 90 | 26 | -22.3 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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