miRNA display CGI


Results 1 - 20 of 94 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692637 NC_006549.1 Singapore grouper iridovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30666 - 122471 90 24 -32.7 5' arm      3' arm
30667 - 123863 90 20.5 -23.5 5' arm      3' arm
30617 + 108399 84 19 -23.5 5' arm      3' arm
30618 + 115257 90 23.5 -36 5' arm      3' arm
30661 - 115346 90 21 -37.5 5' arm      3' arm
30657 - 104552 87 22 -28 5' arm      3' arm
30627 - 549 86 21 -22.5       3' arm
30577 + 1749 86 19 -23.16 YP_164097 5' arm      3' arm
30578 + 3756 89 23 -20.7 YP_164099 5' arm      3' arm
30579 + 3966 89 21 -21.2 YP_164099 5' arm      3' arm
30629 - 5484 84 21 -22.6 YP_164100 5' arm      3' arm
30628 - 5176 88 23.5 -20.4 YP_164100 5' arm      3' arm
30630 - 6645 90 19 -36.2 YP_164102 5' arm      3' arm
30631 - 6869 88 20.5 -28.3 YP_164102 5' arm      3' arm
30580 + 7332 89 20.5 -30.2 YP_164103 5' arm      3' arm
30632 - 7805 89 20 -31.2 YP_164103 5' arm      3' arm
30582 + 10249 88 20.5 -25.5 YP_164107 5' arm      3' arm
30581 + 9610 88 23 -23.82 YP_164107 5' arm      3' arm
30583 + 12656 89 19.5 -23.3 YP_164109 5' arm      3' arm
30584 + 19919 89 22.5 -22.7 YP_164120 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.