miRNA display CGI


Results 1 - 20 of 94 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692637 NC_006549.1 Singapore grouper iridovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30595 + 51790 90 19 -22.6 YP_164152 5' arm      3' arm
30639 - 48514 87 19 -23.8 YP_164147 5' arm      3' arm
30588 + 36387 88 19 -31.4 YP_164135 5' arm      3' arm
30630 - 6645 90 19 -36.2 YP_164102 5' arm      3' arm
30611 + 91442 87 19 -26.3 YP_164191 5' arm      3' arm
30659 - 113461 82 19 -24.3 YP_164223 5' arm      3' arm
30642 - 53960 89 19 -27.8 YP_164152 5' arm      3' arm
30626 + 139659 87 19 -23.4 YP_164257 5' arm      3' arm
30617 + 108399 84 19 -23.5 5' arm      3' arm
30577 + 1749 86 19 -23.16 YP_164097 5' arm      3' arm
30594 + 50449 88 19 -26.4 YP_164151 5' arm      3' arm
30640 - 50556 89 19 -21.34 YP_164151 5' arm      3' arm
30641 - 51677 87 19.5 -19.6 YP_164152 5' arm      3' arm
30596 + 52783 90 19.5 -22.8 YP_164153 5' arm      3' arm
30649 - 75025 90 19.5 -19.6 YP_164173 5' arm      3' arm
30587 + 33873 90 19.5 -25.3 YP_164133 5' arm      3' arm
30645 - 67143 90 19.5 -21.4 YP_164167 5' arm      3' arm
30583 + 12656 89 19.5 -23.3 YP_164109 5' arm      3' arm
30651 - 78193 86 19.5 -20.6 YP_164178 5' arm      3' arm
30609 + 80924 90 19.5 -30.3 YP_164181 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.