miRNA display CGI


Results 1 - 20 of 186 are showing below:
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GenBank Identifier RefSeq Acc. Name
45429984 NC_005809.1 Bordetella phage BIP-1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
26922 - 4234 85 19 -20.3 NP_996618 5' arm      3' arm
26822 + 3552 81 19 -23.3 NP_996618 5' arm      3' arm
26882 + 21962 86 19 -23.4 NP_996631 5' arm      3' arm
26969 - 34170 89 19 -25.9 NP_996647 5' arm      3' arm
26861 + 16207 89 19 -27.9 NP_996623 5' arm      3' arm
26868 + 17778 90 19 -23.2 NP_996624 5' arm      3' arm
26858 + 15559 90 19 -23.4 NP_996623 5' arm      3' arm
26950 - 26490 86 19 -19.9 NP_996637 5' arm      3' arm
26932 - 15320 86 19 -19.8 NP_996623 5' arm      3' arm
26815 + 823 88 19 -22.7 NP_996613 5' arm      3' arm
26880 + 21397 90 19.5 -20.1 NP_996631 5' arm      3' arm
26837 + 8891 89 19.5 -23.7 NP_996620 5' arm      3' arm
26903 + 33284 84 19.5 -20.2 NP_996646 5' arm      3' arm
26819 + 2165 90 19.5 -28.2 NP_996616 5' arm      3' arm
26814 + 637 83 19.5 -29.5 NP_996612 5' arm      3' arm
26907 + 35124 89 19.5 -23.5 NP_996648 5' arm      3' arm
26906 + 34314 87 19.5 -20.5 NP_996648 5' arm      3' arm
26875 + 19919 85 19.5 -19.6 NP_996628 5' arm      3' arm
26865 + 16815 86 19.5 -28 NP_996623 5' arm      3' arm
26905 + 33752 90 19.5 -25.4 NP_996646 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.