miRNA display CGI


Results 1 - 20 of 151 are showing below:
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GenBank Identifier RefSeq Acc. Name
48696910 NC_005882.1 Burkholderia cenocepacia phage BcepMu

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
27642 - 6499 86 19 -23 5' arm      3' arm
27628 - 308 90 19.5 -21.4 5' arm      3' arm
27574 + 9092 89 22.5 -20.7 5' arm      3' arm
27555 + 172 90 20 -37.1 5' arm      3' arm
27647 - 10688 82 22 -21.8 5' arm      3' arm
27665 - 18717 90 22.5 -30.6 5' arm      3' arm
27603 + 24491 90 21.5 -30.2 5' arm      3' arm
27564 + 4889 90 24 -22.8 5' arm      3' arm
27630 - 709 90 20.5 -25.3 YP_024674 5' arm      3' arm
27629 - 551 90 21.5 -19.9 YP_024674 5' arm      3' arm
27631 - 1339 90 20.5 -20.1 YP_024676 5' arm      3' arm
27556 + 1912 90 26 -27.1 YP_024678 5' arm      3' arm
27557 + 2015 90 21 -26 YP_024678 5' arm      3' arm
27632 - 2261 85 19 -21.7 YP_024678 5' arm      3' arm
27558 + 2177 90 20 -20.7 YP_024678 5' arm      3' arm
27559 + 3194 87 19.5 -24.9 YP_024680 5' arm      3' arm
27634 - 3408 88 20.5 -21 YP_024680 5' arm      3' arm
27633 - 3280 87 21.5 -32.1 YP_024680 5' arm      3' arm
27635 - 3569 90 24 -24.1 YP_024681 5' arm      3' arm
27560 + 3546 90 20.5 -22.8 YP_024681 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.