miRNA display CGI


Results 1 - 20 of 151 are showing below:
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GenBank Identifier RefSeq Acc. Name
48696910 NC_005882.1 Burkholderia cenocepacia phage BcepMu

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
27568 + 7236 90 19 -25.3 YP_024683 5' arm      3' arm
27574 + 9092 89 22.5 -20.7 5' arm      3' arm
27565 + 5078 89 22 -23.2 YP_024682 5' arm      3' arm
27566 + 6622 87 21.5 -31.7 YP_024683 5' arm      3' arm
27569 + 7794 88 21.5 -26.7 YP_024685 5' arm      3' arm
27567 + 6909 88 21 -26.5 YP_024683 5' arm      3' arm
27572 + 8599 89 20.5 -21.7 YP_024687 5' arm      3' arm
27573 + 8798 90 20 -20.8 YP_024688 5' arm      3' arm
27575 + 9371 90 19.5 -23.8 YP_024690 5' arm      3' arm
27571 + 8049 90 22.5 -22.8 YP_024686 5' arm      3' arm
27570 + 7893 88 23 -20.1 YP_024685 5' arm      3' arm
27562 + 4510 88 19 -24 YP_024681 5' arm      3' arm
27564 + 4889 90 24 -22.8 5' arm      3' arm
27563 + 4684 87 22 -25.6 YP_024682 5' arm      3' arm
27557 + 2015 90 21 -26 YP_024678 5' arm      3' arm
27560 + 3546 90 20.5 -22.8 YP_024681 5' arm      3' arm
27555 + 172 90 20 -37.1 5' arm      3' arm
27558 + 2177 90 20 -20.7 YP_024678 5' arm      3' arm
27559 + 3194 87 19.5 -24.9 YP_024680 5' arm      3' arm
27561 + 4081 88 19.5 -21.3 YP_024681 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.