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| GenBank Identifier | RefSeq Acc. | Name |
| 45686008 | NC_005832.1 | Ambystoma tigrinum virus |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27084 | + | 56269 | 89 | 23 | -34.1 | YP_003824 | 5' arm 3' arm | ||
| 27238 | - | 101861 | 90 | 21 | -33.6 | YP_003862 | 5' arm 3' arm | ||
| 27029 | + | 10427 | 90 | 22 | -33.6 | YP_003778 | 5' arm 3' arm | ||
| 27196 | - | 53966 | 84 | 21.5 | -32.8 | YP_003823 | 5' arm 3' arm | ||
| 27162 | - | 26580 | 87 | 22 | -32.5 | YP_003794 | 5' arm 3' arm | ||
| 27024 | + | 6181 | 89 | 22 | -32.5 | YP_003777 | 5' arm 3' arm | ||
| 27016 | + | 425 | 90 | 21 | -32 | YP_003772 | 5' arm 3' arm | ||
| 27051 | + | 27546 | 84 | 21.5 | -31.5 | YP_003796 | 5' arm 3' arm | ||
| 27217 | - | 80829 | 85 | 21 | -31.4 | YP_003843 | 5' arm 3' arm | ||
| 27220 | - | 83424 | 88 | 19 | -31.1 | YP_003845 | 5' arm 3' arm | ||
| 27052 | + | 29188 | 90 | 22.5 | -31.1 | YP_003797 | 5' arm 3' arm | ||
| 27058 | + | 36538 | 89 | 23 | -31.1 | YP_003806 | 5' arm 3' arm | ||
| 27036 | + | 12987 | 89 | 22.5 | -30.8 | YP_003781 | 5' arm 3' arm | ||
| 27079 | + | 50414 | 89 | 20 | -30.4 | YP_003819 | 5' arm 3' arm | ||
| 27140 | - | 4214 | 89 | 21 | -30.2 | YP_003776 | 5' arm 3' arm | ||
| 27049 | + | 26460 | 87 | 20 | -30.2 | YP_003794 | 5' arm 3' arm | ||
| 27126 | + | 93900 | 80 | 19 | -30.2 | YP_003854 | 5' arm 3' arm | ||
| 27176 | - | 35122 | 90 | 20 | -30 | YP_003803 | 5' arm 3' arm | ||
| 27101 | + | 75804 | 88 | 19 | -29.9 | YP_003839 | 5' arm 3' arm | ||
| 27123 | + | 92120 | 89 | 19.5 | -29.8 | YP_003852 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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