miRNA display CGI


Results 1 - 20 of 32 are showing below:
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GenBank Identifier RefSeq Acc. Name
61805872 NC_006883.1 Cyanophage P-SSM2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
31678 - 21993 90 21 -20.3 YP_214255 5' arm      3' arm
31666 + 27873 90 19 -22.2 YP_214260 5' arm      3' arm
31669 + 28164 90 19 -25.2 YP_214260 5' arm      3' arm
31672 + 68266 90 20.5 -21.4 5' arm      3' arm
31671 + 68017 86 20 -22.2 5' arm      3' arm
31674 + 146205 85 21 -25.7 YP_214407 5' arm      3' arm
31673 + 144882 90 19.5 -20.1 5' arm      3' arm
31675 + 181189 89 25.5 -25 YP_214455 5' arm      3' arm
31676 + 183790 89 24 -29.1 YP_214463 5' arm      3' arm
31668 + 28068 90 21 -28.9 YP_214260 5' arm      3' arm
31670 + 28255 90 21.5 -20.8 YP_214260 5' arm      3' arm
31667 + 27974 89 22.5 -23.5 YP_214260 5' arm      3' arm
31658 + 21804 90 20 -21 YP_214255 5' arm      3' arm
31659 + 21900 89 20 -21.9 YP_214255 5' arm      3' arm
31662 + 23648 90 23 -26.7 YP_214256 5' arm      3' arm
31665 + 27371 86 22 -24.6 YP_214260 5' arm      3' arm
31661 + 23442 88 21 -26.3 YP_214256 5' arm      3' arm
31663 + 26484 88 21 -20 YP_214259 5' arm      3' arm
31660 + 23093 89 20 -25.5 YP_214256 5' arm      3' arm
31664 + 27248 89 19.5 -25.7 YP_214260 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.