miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
61806202 NC_006884.1 Cyanophage P-SSM4

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
31689 + 11763 87 22 -21 YP_214576 5' arm      3' arm
31690 + 21064 89 19.5 -23.6 YP_214586 5' arm      3' arm
31691 + 43284 87 19.5 -22.8 YP_214609 5' arm      3' arm
31692 + 95242 87 19 -23.1 YP_214648 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.